Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase | APR52_12545 | Q5SLR3 | Positive | 2757090 - 2758070 | 34458.6 |
| alkyl hydroperoxide reductase | APR52_12555 | Not Available | Negative | 2758526 - 2759206 | 24513.1 |
| lysr family transcriptional regulator | APR52_12560 | Not Available | Positive | 2759332 - 2760231 | 30958.4 |
| oxidoreductase | APR52_12565 | Not Available | Negative | 2760241 - 2761008 | 25868.9 |
| lysr family transcriptional regulator | APR52_12570 | Not Available | Positive | 2761122 - 2762060 | 33952.1 |
| mfs transporter | APR52_12575 | Not Available | Positive | 2762183 - 2763202 | 35273.7 |
| hypothetical protein | APR52_12580 | Not Available | Negative | 2763294 - 2763617 | 12017.1 |
| cyclopropane-fatty-acyl-phospholipid synthase | APR52_12585 | Not Available | Negative | 2763631 - 2764902 | 46863.0 |
| salicylyl-coa 5-hydroxylase | APR52_12590 | Q7X281 | Positive | 2765063 - 2767438 | 87329.4 |
| marr family transcriptional regulator | APR52_12595 | Not Available | Positive | 2767455 - 2767934 | 18206.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
