Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_00620 | Q9WYQ4 | Negative | 126213 - 127319 | 39117.1 |
| transketolase | APR52_00625 | Not Available | Negative | 127337 - 128326 | 35115.2 |
| transketolase | APR52_00630 | P55574 | Negative | 128319 - 129167 | 30488.1 |
| abc transporter atp-binding protein | APR52_00635 | Not Available | Negative | 129194 - 129910 | 25526.5 |
| abc transporter atp-binding protein | APR52_00640 | Not Available | Negative | 129891 - 130637 | 26542.5 |
| abc transporter permease | APR52_00645 | Not Available | Negative | 130634 - 131653 | 36503.7 |
| abc transporter permease | APR52_00650 | Not Available | Negative | 131674 - 132567 | 30811.1 |
| abc transporter substrate-binding protein | APR52_00655 | Q8YBM4 | Negative | 132660 - 133934 | 45676.4 |
| hypothetical protein | APR52_00660 | Not Available | Positive | 134142 - 134513 | 13232.0 |
| hypothetical protein | APR52_00665 | Not Available | Negative | 134533 - 136047 | 52904.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
