Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_12495 | Not Available | Positive | 2741523 - 2742497 | 33429.6 |
| fumarylacetoacetase | APR52_12500 | Q94272 | Positive | 2742526 - 2743794 | 45153.6 |
| gamma-glutamyltranspeptidase | APR52_12505 | Q9I406 | Negative | 2743876 - 2745603 | 60276.8 |
| hypothetical protein | APR52_12510 | P20668 | Positive | 2745791 - 2746699 | 32332.2 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_12515 | Not Available | Positive | 2746696 - 2747856 | 41424.6 |
| type iv secretion protein rhs | APR52_12520 | Not Available | Positive | 2748029 - 2750512 | 90283.1 |
| hypothetical protein | APR52_12525 | Not Available | Positive | 2750535 - 2750963 | 16172.2 |
| hypothetical protein | APR52_12530 | Not Available | Positive | 2750986 - 2755554 | 166020.0 |
| hypothetical protein | APR52_12535 | Not Available | Positive | 2755580 - 2755984 | 14656.0 |
| acetoin dehydrogenase | APR52_12540 | Not Available | Positive | 2756077 - 2757099 | 34634.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
