Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mammalian cell entry protein | APR52_12445 | Not Available | Positive | 2731813 - 2732784 | 34098.6 |
| hypothetical protein | APR52_12450 | Not Available | Positive | 2732818 - 2733480 | 23528.2 |
| hypothetical protein | APR52_12455 | Not Available | Positive | 2733537 - 2733758 | 7474.38 |
| hypothetical protein | APR52_12460 | Not Available | Negative | 2733773 - 2734786 | 37157.6 |
| hypothetical protein | APR52_12465 | Not Available | Negative | 2734789 - 2736327 | 54547.2 |
| iclr family transcriptional regulator | APR52_12470 | Not Available | Negative | 2736324 - 2737157 | 29534.5 |
| mbl fold metallo-hydrolase | APR52_12475 | Not Available | Positive | 2737277 - 2738236 | 35191.7 |
| fad-dependent oxidoreductase | APR52_12480 | A0R1T4 | Positive | 2738296 - 2739972 | 61114.1 |
| hypothetical protein | APR52_12485 | Not Available | Positive | 2739997 - 2740194 | 6983.26 |
| homogentisate 1,2-dioxygenase | APR52_12490 | Q1D8L9 | Positive | 2740216 - 2741526 | 48190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
