Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-binding protein | APR52_12345 | P0DP90 | Negative | 2705046 - 2706725 | 60013.2 |
| aspartate aminotransferase | APR52_12350 | P58350 | Negative | 2706769 - 2708004 | 44102.8 |
| abc transporter substrate-binding protein | APR52_12355 | Not Available | Negative | 2708001 - 2708918 | 32689.8 |
| aldehyde dehydrogenase | APR52_12360 | P25795 | Negative | 2709022 - 2710563 | 54142.0 |
| hypothetical protein | APR52_12365 | Not Available | Positive | 2710824 - 2711327 | 17974.5 |
| iclr family transcriptional regulator | APR52_12370 | Not Available | Negative | 2711317 - 2712153 | 29671.9 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | APR52_12375 | A0LUE6 | Positive | 2712361 - 2713431 | 38464.4 |
| abc transporter permease | APR52_12380 | Not Available | Positive | 2713428 - 2714288 | 30929.9 |
| abc transporter permease | APR52_12385 | P0AFL2 | Positive | 2714293 - 2715087 | 28527.7 |
| ferredoxin | APR52_12390 | Not Available | Positive | 2715088 - 2715384 | 10221.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
