Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_12295 | Q49XN1 | Positive | 2696259 - 2697440 | 42916.7 |
| rna helicase | APR52_12300 | P25888 | Negative | 2697434 - 2698699 | 45464.7 |
| translation initiation factor sui1 | APR52_12305 | Q55397 | Positive | 2698832 - 2699218 | 13290.1 |
| hypothetical protein | APR52_12310 | P0AD41 | Positive | 2699218 - 2699454 | 8690.64 |
| rna-binding protein | APR52_12315 | Q9WX37 | Positive | 2699646 - 2700038 | 12778.8 |
| hypothetical protein | APR52_12320 | P70794 | Positive | 2700247 - 2700735 | 16971.4 |
| hypothetical protein | APR52_12325 | Not Available | Positive | 2700749 - 2702260 | 52885.2 |
| hypothetical protein | APR52_12330 | P29942 | Negative | 2702317 - 2703075 | 26459.8 |
| ammonia channel protein | APR52_12335 | O26759 | Positive | 2703493 - 2704728 | 42523.2 |
| hypothetical protein | APR52_12340 | Not Available | Positive | 2704735 - 2705049 | 11478.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
