Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | APR52_12245 | P34275 | Positive | 2686533 - 2687693 | 42615.2 |
| hypothetical protein | APR52_12250 | Not Available | Positive | 2687818 - 2688120 | 11121.3 |
| stress responsive protein | APR52_12255 | Not Available | Positive | 2688141 - 2688500 | 13155.6 |
| hypothetical protein | APR52_12260 | Not Available | Negative | 2688637 - 2689065 | 15354.2 |
| hypothetical protein | APR52_12265 | Not Available | Positive | 2689075 - 2689278 | 7445.66 |
| lysr family transcriptional regulator | APR52_12270 | Not Available | Negative | 2689315 - 2690247 | 33649.9 |
| abc transporter substrate-binding protein | APR52_12275 | Not Available | Positive | 2690437 - 2691405 | 33801.7 |
| carboxylesterase | APR52_12280 | Not Available | Positive | 2691470 - 2693176 | 58790.8 |
| peptidase m20 | APR52_12285 | Q9P6I2 | Positive | 2693188 - 2694615 | 50535.9 |
| hypothetical protein | APR52_12290 | Not Available | Positive | 2694755 - 2696236 | 53552.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
