Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | APR52_12185 | Q9A9Z2 | Positive | 2672451 - 2674238 | 63811.7 |
| lysr family transcriptional regulator | APR52_12195 | P52595 | Negative | 2675637 - 2676575 | 33530.8 |
| carboxymethylenebutenolidase | APR52_12200 | Q43914 | Negative | 2676589 - 2677803 | 44440.0 |
| hypothetical protein | APR52_12205 | P0ABP7 | Positive | 2677898 - 2678560 | 24492.4 |
| hypothetical protein | APR52_12210 | Not Available | Negative | 2678641 - 2678925 | 9430.05 |
| n-acetylmuramoyl-l-alanine amidase | APR52_12215 | P63884 | Negative | 2679106 - 2680692 | 55680.3 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | APR52_12220 | P0AF68 | Negative | 2680689 - 2681177 | 17710.9 |
| epoxyqueuosine reductase | APR52_12225 | F4G4E2 | Positive | 2681193 - 2682230 | 38104.5 |
| transposase | APR52_12230 | Not Available | Positive | 2682383 - 2683534 | 43463.1 |
| histidine kinase | APR52_12240 | Q9I310 | Positive | 2685648 - 2686454 | 27493.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
