Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine dehydratase | APR52_12135 | A4F2N8 | Positive | 2661346 - 2662311 | 34131.9 |
| hypothetical protein | APR52_12140 | Not Available | Negative | 2662422 - 2663150 | 26085.8 |
| abc transporter atp-binding protein | APR52_12145 | Q47C66 | Negative | 2663154 - 2663807 | 23121.1 |
| trna dimethylallyltransferase | APR52_12150 | A1VLE3 | Negative | 2663804 - 2664778 | 34867.8 |
| arac family transcriptional regulator | APR52_12155 | Not Available | Negative | 2664956 - 2665849 | 32224.2 |
| cytochrome c | APR52_12160 | P00099 | Positive | 2666055 - 2666396 | 11499.9 |
| 2fe-2s ferredoxin | APR52_12165 | Not Available | Positive | 2666434 - 2666907 | 16259.4 |
| carbon monoxide dehydrogenase | APR52_12170 | Q51698 | Positive | 2666918 - 2669164 | 80132.6 |
| alpha/beta hydrolase | APR52_12175 | Not Available | Negative | 2669169 - 2670137 | 35257.9 |
| dna mismatch repair protein mutl | APR52_12180 | Q8XWB1 | Negative | 2670363 - 2672291 | 69378.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
