Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein mutt | APR52_12085 | Not Available | Positive | 2649101 - 2649835 | 26738.3 |
| rna polymerase subunit sigma-70 | APR52_12090 | Not Available | Negative | 2649848 - 2651080 | 44343.9 |
| hypothetical protein | APR52_12095 | Not Available | Negative | 2651100 - 2651462 | 12907.2 |
| hypothetical protein | APR52_12100 | Not Available | Positive | 2651648 - 2652046 | 15055.0 |
| flagellar biosynthesis protein flga | APR52_12105 | Not Available | Negative | 2652074 - 2653435 | 48774.3 |
| proline hydroxylase | APR52_12110 | R9UTQ8 | Negative | 2653473 - 2654345 | 32816.1 |
| gntr family transcriptional regulator | APR52_12115 | Not Available | Negative | 2654342 - 2655067 | 25991.9 |
| rnd transporter | APR52_12120 | Not Available | Positive | 2655391 - 2656872 | 52219.5 |
| rnd transporter | APR52_12125 | P37636 | Positive | 2656947 - 2658140 | 41024.3 |
| acriflavine resistance protein b | APR52_12130 | Q57124 | Positive | 2658151 - 2661225 | 109791.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
