Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nipsnap domain containing protein | APR52_00570 | Not Available | Negative | 116878 - 117192 | 12062.5 |
| short-chain dehydrogenase | APR52_00575 | Q53217 | Negative | 117206 - 118012 | 28039.7 |
| abc transporter substrate-binding protein | APR52_00580 | Not Available | Negative | 118009 - 119004 | 35030.4 |
| short-chain dehydrogenase | APR52_00585 | Not Available | Negative | 119030 - 119824 | 27395.1 |
| enoyl-coa hydratase | APR52_00590 | Not Available | Negative | 119839 - 120624 | 27969.7 |
| hypothetical protein | APR52_00595 | I6YCF5 | Negative | 120670 - 121704 | 37250.9 |
| hypothetical protein | APR52_00600 | Not Available | Negative | 121717 - 122898 | 43353.9 |
| hypothetical protein | APR52_00605 | Not Available | Negative | 122921 - 123910 | 34040.2 |
| hypothetical protein | APR52_00610 | Q0S7V5 | Negative | 123894 - 125501 | 57222.8 |
| short-chain dehydrogenase | APR52_00615 | A0A1L5BU05 | Negative | 125503 - 126216 | 24883.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
