Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | APR52_11975 | Not Available | Negative | 2618411 - 2619034 | 22957.4 |
| gntr family transcriptional regulator | APR52_11980 | O07578 | Positive | 2619117 - 2620571 | 52192.1 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | APR52_11985 | Not Available | Negative | 2620562 - 2621422 | 30947.0 |
| 3-methylitaconate isomerase | APR52_11990 | Q937N7 | Negative | 2621440 - 2622633 | 41314.6 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | APR52_11995 | Q937N8 | Negative | 2622646 - 2625270 | 95623.2 |
| abc transporter substrate-binding protein | APR52_12000 | Not Available | Negative | 2625327 - 2626310 | 34186.3 |
| 2-methylcitrate synthase | APR52_12005 | Q937N9 | Negative | 2626432 - 2627598 | 42549.0 |
| thioesterase | APR52_12010 | Not Available | Negative | 2627595 - 2627990 | 13749.8 |
| cro/cl family transcriptional regulator | APR52_12015 | O06581 | Positive | 2628114 - 2629553 | 53187.9 |
| hydrolase | APR52_12030 | Not Available | Negative | 2633385 - 2634455 | 39197.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
