Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_11925 | Not Available | Negative | 2605150 - 2607408 | 80885.7 |
| rifampin adp-ribosyl transferase | APR52_11930 | Not Available | Positive | 2608094 - 2608510 | 15212.9 |
| monooxygenase | APR52_11935 | Q8PDQ6 | Negative | 2608535 - 2610007 | 53098.0 |
| transcriptional regulator | APR52_11940 | B4E8S9 | Positive | 2610267 - 2611208 | 34125.1 |
| alkylhydroperoxidase | APR52_11945 | Not Available | Negative | 2611212 - 2611796 | 21454.1 |
| hypothetical protein | APR52_11950 | Not Available | Negative | 2611820 - 2612452 | 22147.4 |
| luciferase | APR52_11955 | Q53218 | Negative | 2612449 - 2613546 | 38169.4 |
| nitrilotriacetate monooxygenase | APR52_11960 | Not Available | Positive | 2613752 - 2615104 | 49874.7 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | APR52_11965 | Q39AN3 | Negative | 2615127 - 2617418 | 85089.7 |
| lysr family transcriptional regulator | APR52_11970 | P45349 | Positive | 2617526 - 2618410 | 32890.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
