Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_11865 | Not Available | Positive | 2592349 - 2593368 | 36282.4 |
| hypothetical protein | APR52_11875 | Not Available | Negative | 2594626 - 2594958 | 11831.1 |
| taurine dioxygenase | APR52_11880 | Not Available | Positive | 2595175 - 2596086 | 33380.6 |
| n5,n10-methylene tetrahydromethanopterin reductase | APR52_11885 | A4IU28 | Positive | 2596162 - 2597544 | 49999.4 |
| sfnb family sulfur acquisition oxidoreductase | APR52_11890 | Q845S8 | Positive | 2597541 - 2598749 | 43450.2 |
| abc transporter substrate-binding protein | APR52_11895 | Not Available | Positive | 2598780 - 2600390 | 59633.5 |
| peptide abc transporter permease | APR52_11900 | P77308 | Positive | 2600387 - 2601406 | 36016.7 |
| peptide abc transporter permease | APR52_11905 | P77463 | Positive | 2601403 - 2602275 | 30376.7 |
| hypothetical protein | APR52_11915 | Q53194 | Positive | 2603372 - 2604175 | 28768.2 |
| methionine abc transporter substrate-binding protein | APR52_11920 | Q9CK95 | Negative | 2604185 - 2604991 | 29566.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
