Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | APR52_11760 | Q1JUQ1 | Negative | 2571425 - 2573155 | 61977.8 |
| hypothetical protein | APR52_11765 | E8ZB61 | Negative | 2573177 - 2574508 | 45573.1 |
| acyl-coa dehydrogenase | APR52_11770 | Not Available | Negative | 2574520 - 2575689 | 42311.9 |
| arac family transcriptional regulator | APR52_11775 | Not Available | Negative | 2575772 - 2576578 | 29710.8 |
| peptidase s15 | APR52_11780 | Not Available | Negative | 2576610 - 2578325 | 63528.2 |
| hypothetical protein | APR52_11785 | Not Available | Negative | 2578422 - 2579384 | 33932.8 |
| nipsnap family containing protein | APR52_11790 | Not Available | Negative | 2579446 - 2579763 | 12177.6 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase | APR52_11795 | B2RYW9 | Negative | 2579760 - 2580617 | 29825.7 |
| hypothetical protein | APR52_11800 | Not Available | Negative | 2580643 - 2581821 | 41799.8 |
| hypothetical protein | APR52_11805 | Not Available | Negative | 2581862 - 2582839 | 34212.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
