Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-oxalocrotonate tautomerase | APR52_11705 | Not Available | Positive | 2559434 - 2559811 | 13802.3 |
| merr family transcriptional regulator | APR52_11710 | Q9ZHI4 | Positive | 2559847 - 2560230 | 14247.4 |
| hypothetical protein | APR52_11715 | P71668 | Positive | 2560315 - 2561247 | 33198.7 |
| extradiol dioxygenase | APR52_11720 | Not Available | Negative | 2561253 - 2561657 | 14490.9 |
| 3-oxoacyl-acp reductase | APR52_11725 | Not Available | Negative | 2561671 - 2562423 | 25848.9 |
| arac family transcriptional regulator | APR52_11730 | Q46855 | Positive | 2562571 - 2563452 | 31970.1 |
| iclr family transcriptional regulator | APR52_11735 | Not Available | Negative | 2563478 - 2564281 | 29510.4 |
| hypothetical protein | APR52_11745 | Not Available | Positive | 2566050 - 2567039 | 35140.7 |
| hypothetical protein | APR52_11750 | Not Available | Negative | 2567058 - 2567630 | 19864.8 |
| indolepyruvate ferredoxin oxidoreductase | APR52_11755 | P80910 | Negative | 2567907 - 2571398 | 125622.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
