Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_11655 | P29068 | Negative | 2547679 - 2549607 | 70431.6 |
| lysr family transcriptional regulator | APR52_11660 | Q04778 | Negative | 2549963 - 2550844 | 32226.5 |
| dna-binding protein | APR52_11665 | Not Available | Positive | 2550961 - 2551515 | 19668.9 |
| dna-binding protein | APR52_11670 | Not Available | Positive | 2551508 - 2551909 | 14270.0 |
| 3-oxoacyl-acp reductase | APR52_11675 | Not Available | Positive | 2551932 - 2552750 | 28089.5 |
| acetyl-coa acetyltransferase | APR52_11680 | Not Available | Positive | 2552765 - 2553937 | 40887.8 |
| acyl-coa synthetase | APR52_11685 | Not Available | Positive | 2553934 - 2555523 | 56910.3 |
| abc transporter substrate-binding protein | APR52_11690 | P55572 | Positive | 2555593 - 2556606 | 37299.9 |
| abc transporter permease | APR52_11695 | P40800 | Positive | 2556639 - 2558486 | 64095.7 |
| lysr family transcriptional regulator | APR52_11700 | P52686 | Negative | 2558488 - 2559345 | 30728.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
