Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_11555 | Not Available | Positive | 2528358 - 2528729 | 13171.0 |
| hypothetical protein | APR52_11560 | Not Available | Positive | 2528726 - 2529412 | 24715.9 |
| lysr family transcriptional regulator | APR52_11565 | Not Available | Positive | 2529507 - 2530430 | 34074.2 |
| hypothetical protein | APR52_11570 | P0A177 | Positive | 2530642 - 2531538 | 31194.6 |
| hypothetical protein | APR52_11575 | Not Available | Positive | 2531547 - 2532323 | 27428.1 |
| hypothetical protein | APR52_11580 | Not Available | Positive | 2532384 - 2534003 | 57435.5 |
| hypothetical protein | APR52_11585 | Not Available | Positive | 2534000 - 2534395 | 14323.2 |
| streptomycin kinase | APR52_11590 | P13082 | Negative | 2534422 - 2535222 | 28169.9 |
| gntr family transcriptional regulator | APR52_11595 | Q83PX4 | Negative | 2535227 - 2536030 | 29238.7 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | APR52_11600 | Not Available | Positive | 2536166 - 2537029 | 30354.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
