Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | APR52_00515 | Not Available | Negative | 106474 - 107130 | 24109.6 |
| hypothetical protein | APR52_00520 | P43493 | Negative | 107173 - 107496 | 11429.7 |
| abc transporter permease | APR52_00525 | Not Available | Negative | 107528 - 108565 | 36198.2 |
| abc transporter permease | APR52_00530 | P0A2J2 | Negative | 108568 - 109440 | 30399.5 |
| abc transporter atp-binding protein | APR52_00535 | Not Available | Negative | 109455 - 110168 | 26114.8 |
| abc transporter atp-binding protein | APR52_00540 | Not Available | Negative | 110168 - 110971 | 28873.1 |
| hypothetical protein | APR52_00550 | Q9WYG0 | Positive | 112013 - 112744 | 25351.5 |
| hypothetical protein | APR52_00555 | P32382 | Positive | 112752 - 114740 | 71147.1 |
| hypothetical protein | APR52_00560 | Q06816 | Positive | 114845 - 116002 | 42818.8 |
| hypothetical protein | APR52_00565 | Not Available | Negative | 116010 - 116831 | 29562.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
