Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_11405 | P42061 | Negative | 2480583 - 2482148 | 58643.0 |
| phosphonoacetaldehyde dehydrogenase | APR52_11410 | Q92UV7 | Negative | 2482258 - 2483703 | 52903.7 |
| alcohol dehydrogenase | APR52_11415 | P31005 | Negative | 2483700 - 2484797 | 38877.8 |
| phosphonoacetate hydrolase | APR52_11420 | Q50HR6 | Negative | 2484808 - 2486046 | 44103.0 |
| amidase | APR52_11425 | Q2RGY4 | Negative | 2486219 - 2487760 | 53527.9 |
| abc transporter atp-binding protein | APR52_11430 | Not Available | Negative | 2487816 - 2488508 | 24948.6 |
| abc transporter atp-binding protein | APR52_11435 | Not Available | Negative | 2488502 - 2489272 | 28047.9 |
| urea abc transporter permease subunit urtc | APR52_11440 | Not Available | Negative | 2489269 - 2490384 | 39251.0 |
| urea abc transporter permease subunit urtb | APR52_11445 | Not Available | Negative | 2490390 - 2491283 | 30785.2 |
| abc transporter substrate-binding protein | APR52_11450 | Not Available | Negative | 2491360 - 2492607 | 45203.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
