Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase | APR52_11350 | Q1M7F4 | Positive | 2468748 - 2469416 | 23696.5 |
| gntr family transcriptional regulator | APR52_11355 | P70790 | Positive | 2469413 - 2470216 | 30207.1 |
| magnesium transporter accessory protein | APR52_11365 | Not Available | Negative | 2470816 - 2472099 | 44079.5 |
| alkaline phosphatase | APR52_11370 | P42251 | Negative | 2472125 - 2473729 | 59271.9 |
| hypothetical protein | APR52_11375 | Not Available | Negative | 2473780 - 2474802 | 35969.4 |
| hypothetical protein | APR52_11380 | Not Available | Negative | 2474960 - 2476219 | 44292.9 |
| hypothetical protein | APR52_11385 | Q6NDI4 | Negative | 2476216 - 2477016 | 29358.3 |
| hypothetical protein | APR52_11390 | Q8ZQM4 | Negative | 2477013 - 2478731 | 61633.5 |
| hypothetical protein | APR52_11395 | A0A0H2ZFV0 | Negative | 2478728 - 2479573 | 29745.3 |
| hypothetical protein | APR52_11400 | Q5PGP5 | Negative | 2479577 - 2480533 | 33818.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
