Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter atp-binding protein | APR52_11300 | Q9JUX4 | Positive | 2459052 - 2459885 | 31543.4 |
| hypothetical protein | APR52_11305 | Not Available | Positive | 2459900 - 2460115 | 7419.84 |
| amidase | APR52_11310 | Q936X3 | Positive | 2460112 - 2461539 | 49347.1 |
| hypothetical protein | APR52_11315 | Not Available | Positive | 2461562 - 2461948 | 14404.9 |
| abc transporter substrate-binding protein | APR52_11320 | Not Available | Positive | 2461994 - 2463112 | 39813.0 |
| abc transporter permease | APR52_11325 | Not Available | Positive | 2463230 - 2464306 | 36660.5 |
| abc transporter permease | APR52_11330 | O05255 | Positive | 2464303 - 2465226 | 31241.6 |
| formamidase | APR52_11335 | Q89H51 | Positive | 2465270 - 2466271 | 36191.3 |
| cysteine hydrolase | APR52_11340 | Not Available | Positive | 2466268 - 2466978 | 25481.7 |
| abc transporter atp-binding protein | APR52_11345 | Not Available | Positive | 2467160 - 2468734 | 55711.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
