Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR52_11250 | A0A0H3NIL4 | Negative | 2447033 - 2448217 | 42561.5 |
| two-component system response regulator | APR52_11255 | A0QTK2 | Negative | 2448303 - 2449025 | 26653.4 |
| halogenase | APR52_11260 | A0A0U2JT80 | Negative | 2449092 - 2450741 | 62200.8 |
| hypothetical protein | APR52_11265 | Not Available | Negative | 2450755 - 2451576 | 27661.8 |
| 3-oxoacyl-acp synthase | APR52_11270 | Q8L3X9 | Negative | 2451573 - 2452766 | 41212.8 |
| ampg family muropeptide mfs transporter | APR52_11275 | P0AE17 | Negative | 2452906 - 2454285 | 48775.2 |
| peptidase m48 | APR52_11280 | Q3SZN3 | Positive | 2454375 - 2455229 | 30170.3 |
| allophanate hydrolase | APR52_11285 | Q936X2 | Positive | 2455465 - 2457183 | 59776.3 |
| abc transporter substrate-binding protein | APR52_11290 | Not Available | Positive | 2457222 - 2458223 | 35352.9 |
| taurine abc transporter permease | APR52_11295 | Not Available | Positive | 2458228 - 2459055 | 29410.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
