Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-asparaginase | APR52_11200 | P50286 | Negative | 2436188 - 2437246 | 37474.6 |
| mfs transporter | APR52_11205 | P16482 | Positive | 2437568 - 2438857 | 45047.4 |
| amidohydrolase | APR52_11210 | Not Available | Positive | 2438902 - 2440113 | 42760.4 |
| exonuclease | APR52_11215 | Q478Z5 | Negative | 2440333 - 2441310 | 35431.7 |
| branched-chain amino acid aminotransferase | APR52_11220 | O86428 | Positive | 2441525 - 2442478 | 35132.9 |
| hypothetical protein | APR52_11225 | Not Available | Positive | 2442484 - 2442693 | 7591.16 |
| hypothetical protein | APR52_11230 | Not Available | Positive | 2442736 - 2443860 | 42364.5 |
| hypothetical protein | APR52_11235 | Not Available | Negative | 2443857 - 2444894 | 37002.9 |
| tetr family transcriptional regulator | APR52_11240 | P67431 | Negative | 2445004 - 2445627 | 22106.4 |
| polymerase | APR52_11245 | Not Available | Negative | 2445681 - 2446952 | 46231.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
