Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_11150 | Not Available | Negative | 2425405 - 2426391 | 34020.1 |
| monooxygenase | APR52_11155 | Q5ATH0 | Negative | 2426388 - 2428088 | 62098.0 |
| lysr family transcriptional regulator | APR52_11160 | Not Available | Positive | 2428136 - 2429089 | 33661.9 |
| lysr family transcriptional regulator | APR52_11165 | Not Available | Negative | 2429094 - 2430011 | 33247.4 |
| aldolase | APR52_11170 | Not Available | Positive | 2430124 - 2430897 | 28602.9 |
| hypothetical protein | APR52_11175 | Not Available | Positive | 2430935 - 2431936 | 34572.2 |
| hypothetical protein | APR52_11180 | Q2VEQ7 | Positive | 2431933 - 2432886 | 33729.1 |
| dna repair protein rada | APR52_11185 | P96963 | Positive | 2432939 - 2434330 | 48497.5 |
| glycerate kinase | APR52_11190 | Not Available | Positive | 2434796 - 2435227 | 15556.0 |
| lysr family transcriptional regulator | APR52_11195 | P52691 | Negative | 2435224 - 2436171 | 34903.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
