Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_11000 | Not Available | Negative | 2398417 - 2398644 | 8038.83 |
| hypothetical protein | APR52_11005 | Not Available | Positive | 2398871 - 2399248 | 12635.0 |
| glutathione peroxidase | APR52_11010 | O32770 | Negative | 2399252 - 2399743 | 17589.0 |
| hypothetical protein | APR52_11015 | Not Available | Negative | 2399754 - 2400644 | 30458.6 |
| mfs transporter | APR52_11020 | A1JPE9 | Negative | 2400678 - 2401982 | 46684.2 |
| alanine racemase | APR52_11025 | C5CX88 | Positive | 2402160 - 2403269 | 40578.5 |
| hypothetical protein | APR52_11030 | Not Available | Positive | 2403266 - 2404003 | 26084.1 |
| lysr family transcriptional regulator | APR52_11035 | Not Available | Positive | 2404019 - 2405011 | 35584.2 |
| amp-dependent synthetase | APR52_11040 | Not Available | Positive | 2405117 - 2406727 | 57589.4 |
| acyl-coa dehydrogenase | APR52_11045 | Not Available | Positive | 2406742 - 2407950 | 43222.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
