Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease | APR52_10950 | P45049 | Negative | 2386954 - 2388492 | 54112.1 |
| hypothetical protein | APR52_10955 | Not Available | Positive | 2388776 - 2389585 | 28822.6 |
| transcriptional regulator | APR52_10960 | Q53044 | Positive | 2389650 - 2389988 | 12274.0 |
| ammonia channel protein | APR52_10965 | P69680 | Positive | 2390018 - 2391439 | 47676.5 |
| gluconolactonase | APR52_10970 | Not Available | Positive | 2391703 - 2392632 | 33525.6 |
| lysr family transcriptional regulator | APR52_10975 | Not Available | Positive | 2392650 - 2393543 | 32355.7 |
| glycolate oxidase subunit glcd | APR52_10980 | P0AEQ0 | Positive | 2393683 - 2395185 | 53234.1 |
| glycolate oxidase | APR52_10985 | P52073 | Positive | 2395194 - 2396312 | 39326.9 |
| hypothetical protein | APR52_10990 | Not Available | Positive | 2396321 - 2397133 | 28801.9 |
| glycolate oxidase iron-sulfur subunit | APR52_10995 | P52074 | Positive | 2397177 - 2398412 | 44352.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
