Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase | APR52_10900 | Not Available | Negative | 2372938 - 2373756 | 29262.2 |
| hypothetical protein | APR52_10905 | Not Available | Negative | 2373749 - 2375884 | 74424.8 |
| hypothetical protein | APR52_10910 | Not Available | Negative | 2375930 - 2376346 | 15159.3 |
| type vi secretion protein | APR52_10915 | Not Available | Positive | 2376472 - 2376987 | 18896.8 |
| type vi secretion protein | APR52_10920 | Not Available | Positive | 2377177 - 2378559 | 51132.5 |
| hypothetical protein | APR52_10925 | P46827 | Positive | 2378568 - 2379917 | 48956.5 |
| hypothetical protein | APR52_10930 | Not Available | Positive | 2379919 - 2383599 | 136369.0 |
| type vi secretion system protein impm | APR52_10935 | Not Available | Positive | 2383599 - 2384315 | 25828.4 |
| serine/threonine protein kinase | APR52_10940 | Q9RRH3 | Positive | 2384344 - 2386341 | 69432.9 |
| isochorismatase | APR52_10945 | Not Available | Negative | 2386358 - 2386900 | 19415.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
