Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence protein scie type | APR52_10845 | Not Available | Positive | 2358115 - 2358981 | 30748.3 |
| hypothetical protein | APR52_10850 | Not Available | Positive | 2358981 - 2359538 | 20648.7 |
| type vi secretion system protein impg | APR52_10855 | Q9I744 | Positive | 2359538 - 2361418 | 69836.2 |
| hypothetical protein | APR52_10860 | Not Available | Positive | 2361415 - 2362596 | 43819.9 |
| clpv1 family t6ss atpase | APR52_10865 | Not Available | Positive | 2362593 - 2365325 | 98559.9 |
| hypothetical protein | APR52_10875 | Not Available | Positive | 2367734 - 2368210 | 16829.8 |
| hypothetical protein | APR52_10880 | Not Available | Positive | 2368256 - 2370775 | 92201.6 |
| hypothetical protein | APR52_10885 | Not Available | Positive | 2370772 - 2371821 | 38104.9 |
| hypothetical protein | APR52_10890 | Not Available | Positive | 2371865 - 2372527 | 23644.3 |
| type vi secretion protein | APR52_10895 | Not Available | Positive | 2372541 - 2372921 | 13541.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
