Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR52_10795 | Not Available | Positive | 2345485 - 2346228 | 27269.2 |
| nicotinamidase | APR52_10800 | P21369 | Positive | 2346314 - 2347039 | 25596.5 |
| abc transporter substrate-binding protein | APR52_10805 | Not Available | Positive | 2347132 - 2348265 | 40009.2 |
| ferredoxin | APR52_10810 | Not Available | Positive | 2348243 - 2348749 | 17545.2 |
| aldehyde dehydrogenase | APR52_10815 | Not Available | Positive | 2348746 - 2352489 | 132753.0 |
| fumarylacetoacetate hydrolase | APR52_10820 | Not Available | Positive | 2352692 - 2353882 | 41541.8 |
| type vi secretion protein impa | APR52_10825 | Not Available | Positive | 2354063 - 2355154 | 39608.3 |
| hypothetical protein | APR52_10830 | Not Available | Positive | 2355216 - 2355785 | 20591.4 |
| evpb family type vi secretion protein | APR52_10835 | Not Available | Positive | 2355819 - 2357324 | 56572.5 |
| hypothetical protein | APR52_10840 | Not Available | Positive | 2357370 - 2357852 | 17200.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
