Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamidase | APR52_10745 | Q0QLE9 | Negative | 2334541 - 2335740 | 41516.5 |
| tetr family transcriptional regulator | APR52_10750 | Not Available | Negative | 2335686 - 2336456 | 28826.0 |
| ferredoxin-nadp reductase | APR52_10755 | Q44532 | Negative | 2336476 - 2337249 | 29027.9 |
| 6-hydroxynicotinate reductase | APR52_10760 | Q0QLF7 | Positive | 2337554 - 2339182 | 57362.8 |
| thiamine biosynthesis protein apbe | APR52_10765 | Not Available | Positive | 2339185 - 2340078 | 31801.9 |
| hypothetical protein | APR52_10770 | Not Available | Positive | 2340100 - 2340744 | 22947.9 |
| peptide synthetase | APR52_10775 | Not Available | Positive | 2340791 - 2341375 | 20100.4 |
| abc transporter substrate-binding protein | APR52_10780 | Not Available | Positive | 2341451 - 2342656 | 43778.4 |
| abc transporter permease | APR52_10785 | Not Available | Positive | 2342799 - 2344727 | 68387.4 |
| abc transporter atp-binding protein | APR52_10790 | Not Available | Positive | 2344724 - 2345488 | 27787.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
