Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate aminotransferase | APR52_10690 | Q5FRR4 | Positive | 2322612 - 2323751 | 40691.3 |
| mfs transporter | APR52_10695 | A0LNN5 | Positive | 2323748 - 2324953 | 40773.6 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | APR52_10700 | O33465 | Positive | 2325011 - 2326060 | 37659.8 |
| twitching motility protein pilt | APR52_10705 | P55511 | Negative | 2326082 - 2326501 | 15579.7 |
| hypothetical protein | APR52_10710 | Not Available | Negative | 2326501 - 2326761 | 9502.19 |
| lysr family transcriptional regulator | APR52_10715 | Not Available | Negative | 2326815 - 2327732 | 32766.6 |
| hypothetical protein | APR52_10720 | Q6FAW0 | Positive | 2327849 - 2328286 | 15621.5 |
| hypothetical protein | APR52_10730 | Not Available | Positive | 2331327 - 2333114 | 65575.8 |
| glycosyl transferase | APR52_10735 | P37787 | Positive | 2333150 - 2334124 | 35472.6 |
| polysaccharide synthesis protein gtra | APR52_10740 | Not Available | Positive | 2334126 - 2334527 | 14093.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
