Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_10585 | A9WGD1 | Positive | 2297895 - 2298683 | 28215.6 |
| permease | APR52_10590 | Not Available | Negative | 2298752 - 2300239 | 51639.2 |
| nad-dependent epimerase | APR52_10595 | Not Available | Negative | 2300412 - 2301404 | 36479.1 |
| xre family transcriptional regulator | APR52_10600 | Not Available | Negative | 2301507 - 2302049 | 19689.8 |
| gntr family transcriptional regulator | APR52_10605 | Not Available | Negative | 2302061 - 2302828 | 28010.7 |
| asp/glu/hydantoin racemase | APR52_10610 | Q00924 | Negative | 2302875 - 2303615 | 26158.9 |
| nitrate reductase | APR52_10615 | P94575 | Negative | 2303644 - 2305137 | 53868.1 |
| s-layer protein | APR52_10620 | Not Available | Negative | 2305389 - 2306929 | 55881.1 |
| atp-dependent dna helicase recq | APR52_10630 | P15043 | Negative | 2308041 - 2309915 | 68152.3 |
| abc transporter permease | APR52_10635 | Not Available | Positive | 2310289 - 2311251 | 33700.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
