Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_10480 | Q8X8Q3 | Negative | 2272430 - 2273572 | 41393.0 |
| short-chain dehydrogenase | APR52_10485 | Not Available | Negative | 2273706 - 2274521 | 28012.1 |
| crotonase | APR52_10490 | Not Available | Negative | 2274563 - 2275369 | 29120.3 |
| thiolase | APR52_10495 | Q07598 | Negative | 2275402 - 2276565 | 40154.0 |
| hypothetical protein | APR52_10500 | Not Available | Negative | 2276562 - 2276996 | 14973.1 |
| abc transporter substrate-binding protein | APR52_10505 | Not Available | Negative | 2277035 - 2278021 | 34895.6 |
| iclr family transcriptional regulator | APR52_10510 | Not Available | Positive | 2278218 - 2278982 | 27466.2 |
| acyl-coa dehydrogenase | APR52_10515 | Not Available | Positive | 2279046 - 2280197 | 41735.3 |
| acyl-coa synthetase | APR52_10520 | Not Available | Positive | 2280211 - 2282346 | 75048.2 |
| alpha-methylacyl-coa racemase | APR52_10525 | A9X6P9 | Positive | 2282343 - 2283449 | 38798.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
