Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_00405 | Not Available | Positive | 80882 - 82477 | 58046.2 |
| type iv secretion protein rhs | APR52_00410 | E0SGL7 | Positive | 82513 - 86856 | 160707.0 |
| hypothetical protein | APR52_00415 | Not Available | Positive | 86900 - 87430 | 19318.8 |
| hypothetical protein | APR52_00420 | Not Available | Negative | 87462 - 88448 | 34838.9 |
| hypothetical protein | APR52_00425 | Not Available | Negative | 88451 - 89284 | 30753.3 |
| hypothetical protein | APR52_00430 | Q47141 | Positive | 89400 - 90308 | 32984.8 |
| hypothetical protein | APR52_00435 | Not Available | Negative | 90333 - 91520 | 44170.4 |
| hypothetical protein | APR52_00440 | Not Available | Negative | 91535 - 92095 | 20593.8 |
| phosphoesterase | APR52_00445 | Not Available | Positive | 92337 - 94574 | 81218.8 |
| hypothetical protein | APR52_00450 | Not Available | Positive | 94595 - 96124 | 54084.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
