Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_10430 | Not Available | Negative | 2260729 - 2261148 | 14220.8 |
| hypothetical protein | APR52_10435 | Q9ZLR4 | Negative | 2261330 - 2262445 | 40055.0 |
| gntr family transcriptional regulator | APR52_10440 | Not Available | Negative | 2262547 - 2263254 | 25712.8 |
| c4-dicarboxylate abc transporter | APR52_10445 | Q8XUB6 | Negative | 2263276 - 2264616 | 46890.3 |
| hypothetical protein | APR52_10450 | Not Available | Negative | 2264798 - 2267536 | 96103.7 |
| hypothetical protein | APR52_10455 | Not Available | Negative | 2267682 - 2269484 | 64893.4 |
| hypothetical protein | APR52_10460 | P54662 | Negative | 2269503 - 2270114 | 21798.7 |
| hypothetical protein | APR52_10465 | Not Available | Positive | 2270261 - 2270659 | 14958.1 |
| hypothetical protein | APR52_10470 | Not Available | Negative | 2270672 - 2271331 | 23452.6 |
| dna-binding protein | APR52_10475 | Q9I1W5 | Negative | 2271385 - 2272311 | 33601.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
