Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_10380 | Q47539 | Negative | 2247568 - 2248338 | 28072.1 |
| nitrate abc transporter atp-binding protein | APR52_10385 | Q65M64 | Negative | 2248348 - 2249199 | 31850.7 |
| taurine abc transporter permease | APR52_10390 | Not Available | Negative | 2249199 - 2250233 | 36478.1 |
| malic enzyme | APR52_10395 | P76558 | Negative | 2250444 - 2252744 | 82145.6 |
| hydroxylase | APR52_10400 | Q0VZ69 | Positive | 2253001 - 2254338 | 49989.7 |
| 2-hydroxy-3-oxopropionate reductase | APR52_10405 | P77161 | Negative | 2254477 - 2255385 | 31162.9 |
| hydroxypyruvate isomerase | APR52_10410 | P30147 | Negative | 2255421 - 2256206 | 28762.3 |
| glyoxylate carboligase | APR52_10415 | P0AEP8 | Negative | 2256370 - 2258163 | 65025.5 |
| lysr family transcriptional regulator | APR52_10420 | Not Available | Positive | 2258294 - 2259196 | 33010.9 |
| carotenoid oxygenase | APR52_10425 | Q6PBW5 | Negative | 2259213 - 2260718 | 54687.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
