Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | APR52_10330 | Not Available | Positive | 2238817 - 2239506 | 25390.0 |
| histidine kinase | APR52_10335 | Not Available | Positive | 2239503 - 2240939 | 52701.2 |
| aspartyl beta-hydroxylase | APR52_10340 | Not Available | Positive | 2241031 - 2241927 | 34718.8 |
| pa-phosphatase | APR52_10345 | Not Available | Negative | 2241947 - 2242546 | 21720.9 |
| two-component system response regulator | APR52_10350 | P55701 | Positive | 2242720 - 2243403 | 24570.7 |
| histidine kinase | APR52_10355 | Not Available | Positive | 2243400 - 2244746 | 48572.5 |
| hypothetical protein | APR52_10360 | Not Available | Negative | 2244747 - 2245868 | 41096.2 |
| oxidoreductase | APR52_10365 | Not Available | Positive | 2245953 - 2246189 | 8179.87 |
| merr family transcriptional regulator | APR52_10370 | Not Available | Negative | 2246153 - 2246623 | 16954.5 |
| sam-dependent methyltransferase | APR52_10375 | Not Available | Positive | 2246701 - 2247564 | 30354.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
