Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cmp deaminase | APR52_10280 | O59834 | Negative | 2229961 - 2230488 | 18924.1 |
| rieske (2fe-2s) protein | APR52_10285 | H9N289 | Positive | 2230912 - 2231991 | 40884.5 |
| amino acid dehydrogenase | APR52_10290 | A9BU40 | Negative | 2232128 - 2233429 | 47133.6 |
| asnc family transcriptional regulator | APR52_10295 | P37424 | Positive | 2233559 - 2234026 | 17522.5 |
| gcn5 family acetyltransferase | APR52_10300 | Not Available | Positive | 2234051 - 2234533 | 17951.3 |
| osmotically inducible protein osmc | APR52_10305 | Not Available | Positive | 2234562 - 2234963 | 14664.4 |
| hypothetical protein | APR52_10310 | P32959 | Negative | 2234975 - 2236174 | 42632.3 |
| hxlr family transcriptional regulator | APR52_10315 | Not Available | Negative | 2236185 - 2236544 | 13369.3 |
| 3-hydroxyisobutyrate dehydrogenase | APR52_10320 | Q2TW47 | Positive | 2236659 - 2237540 | 30591.9 |
| hypothetical protein | APR52_10325 | Not Available | Negative | 2237557 - 2238702 | 41255.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
