Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_10230 | Not Available | Negative | 2218617 - 2218964 | 12590.0 |
| lipoprotein nlpd | APR52_10235 | Not Available | Negative | 2219392 - 2220144 | 26230.4 |
| hypothetical protein | APR52_10240 | Not Available | Negative | 2220234 - 2221640 | 49767.0 |
| cystathionine beta-lyase | APR52_10245 | Q07703 | Negative | 2221871 - 2223082 | 43075.4 |
| abc transporter substrate-binding protein | APR52_10250 | Not Available | Negative | 2223118 - 2224149 | 35833.9 |
| sulfurtransferase | APR52_10255 | Not Available | Negative | 2224244 - 2225824 | 56297.8 |
| hypothetical protein | APR52_10260 | Not Available | Negative | 2225861 - 2226451 | 21503.5 |
| lysr family transcriptional regulator | APR52_10265 | P52662 | Positive | 2226558 - 2227430 | 32001.0 |
| diguanylate cyclase | APR52_10270 | Not Available | Negative | 2227458 - 2228984 | 54295.1 |
| urease accessory protein ured | APR52_10275 | C5CVT2 | Negative | 2229109 - 2229939 | 30144.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
