Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_10180 | P0AAT0 | Positive | 2208301 - 2208531 | 8529.22 |
| iron dicitrate transport regulator fecr | APR52_10185 | Q72IV5 | Positive | 2208592 - 2209317 | 26196.7 |
| acetyltransferase | APR52_10190 | O07614 | Negative | 2209659 - 2210117 | 16808.0 |
| hypothetical protein | APR52_10195 | Not Available | Negative | 2210176 - 2211441 | 47203.4 |
| adhesin | APR52_10200 | Not Available | Positive | 2212647 - 2214401 | 53413.5 |
| hypothetical protein | APR52_10205 | Not Available | Positive | 2214506 - 2215153 | 24008.9 |
| glycosyl transferase | APR52_10210 | Q9M8Z7 | Positive | 2215150 - 2216382 | 42863.6 |
| hypothetical protein | APR52_10215 | Not Available | Negative | 2216383 - 2216949 | 20778.8 |
| hypothetical protein | APR52_10220 | Not Available | Positive | 2217069 - 2217992 | 33141.9 |
| hypothetical protein | APR52_10225 | Not Available | Positive | 2218184 - 2218486 | 11169.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
