Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter | APR52_10130 | C9XVZ5 | Positive | 2195199 - 2196341 | 39695.2 |
| acriflavine resistance protein b | APR52_10135 | Not Available | Positive | 2196338 - 2199508 | 112802.0 |
| two-component system response regulator | APR52_10140 | Not Available | Positive | 2199531 - 2200217 | 25632.4 |
| histidine kinase | APR52_10145 | Q8XBY4 | Positive | 2200214 - 2201590 | 50184.3 |
| sulfurtransferase | APR52_10150 | Not Available | Positive | 2201744 - 2202682 | 32778.7 |
| histidine kinase | APR52_10155 | Q1M799 | Positive | 2202740 - 2204128 | 50802.2 |
| luxr family transcriptional regulator | APR52_10160 | Q1M7A0 | Positive | 2204143 - 2204796 | 23557.6 |
| dna-binding protein hu | APR52_10165 | Not Available | Positive | 2205111 - 2205401 | 9752.56 |
| hydrolase nlp/p60 | APR52_10170 | P0AFV6 | Positive | 2205600 - 2206091 | 16955.2 |
| carbon starvation protein a | APR52_10175 | P15078 | Positive | 2206208 - 2208286 | 73755.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
