Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | APR52_10080 | P94549 | Positive | 2184222 - 2184980 | 26882.3 |
| mfs transporter | APR52_10085 | P77389 | Positive | 2185145 - 2186344 | 40734.0 |
| hypothetical protein | APR52_10090 | Not Available | Negative | 2186349 - 2188223 | 68319.3 |
| hypothetical protein | APR52_10095 | Not Available | Negative | 2188274 - 2189278 | 37495.2 |
| anti-sigma factor | APR52_10100 | Not Available | Negative | 2189448 - 2190107 | 23200.8 |
| rna polymerase subunit sigma-24 | APR52_10105 | P0AGB8 | Negative | 2190094 - 2190657 | 21599.4 |
| hypothetical protein | APR52_10110 | Not Available | Positive | 2190801 - 2192042 | 42431.6 |
| alcohol dehydrogenase | APR52_10115 | O05408 | Positive | 2192129 - 2193139 | 36869.2 |
| hypothetical protein | APR52_10120 | Not Available | Negative | 2193164 - 2193409 | 8452.13 |
| rnd transporter | APR52_10125 | Not Available | Positive | 2193626 - 2195092 | 50807.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
