Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide pyrophosphohydrolase | APR52_10030 | Not Available | Positive | 2174201 - 2174515 | 11703.9 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_10035 | Not Available | Positive | 2174652 - 2175920 | 46006.3 |
| urea abc transporter permease | APR52_10040 | Not Available | Positive | 2176011 - 2177558 | 54331.7 |
| urea abc transporter permease subunit urtc | APR52_10045 | Not Available | Positive | 2177555 - 2178781 | 44513.3 |
| abc transporter atp-binding protein | APR52_10050 | Not Available | Positive | 2178778 - 2179656 | 31793.4 |
| abc transporter atp-binding protein | APR52_10055 | Not Available | Positive | 2179669 - 2180361 | 25254.2 |
| hypothetical protein | APR52_10060 | Not Available | Negative | 2180366 - 2181187 | 29596.9 |
| enoyl-coa hydratase | APR52_10065 | Not Available | Positive | 2181285 - 2182070 | 28038.8 |
| hypothetical protein | APR52_10070 | Q7TNE1 | Positive | 2182194 - 2183234 | 37325.9 |
| hypothetical protein | APR52_10075 | Not Available | Positive | 2183272 - 2184225 | 33841.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
