Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | APR52_09975 | Q8P3Z4 | Negative | 2163505 - 2164842 | 48508.6 |
| peptidase m50 | APR52_09980 | P70995 | Negative | 2164869 - 2165540 | 24374.8 |
| translation factor sua5 | APR52_09985 | P0AFR5 | Negative | 2165585 - 2166220 | 23232.1 |
| hypothetical protein | APR52_09990 | Not Available | Negative | 2166236 - 2167213 | 34744.2 |
| phosphoesterase | APR52_09995 | Q7NXD4 | Negative | 2167215 - 2168072 | 30995.4 |
| magnesium transporter cora | APR52_10000 | Not Available | Negative | 2168168 - 2169226 | 38811.6 |
| nuclease pin | APR52_10005 | P0AFJ9 | Negative | 2169240 - 2170880 | 57224.2 |
| polyphosphate kinase | APR52_10010 | Q9I154 | Positive | 2171039 - 2171968 | 36119.3 |
| phospholipase | APR52_10015 | Not Available | Positive | 2172028 - 2173071 | 36892.2 |
| transcriptional regulator | APR52_10025 | Not Available | Negative | 2173520 - 2174128 | 22016.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
