Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_00355 | Not Available | Negative | 69490 - 69939 | 15195.2 |
| abc transporter substrate-binding protein | APR52_00360 | Not Available | Positive | 70153 - 71277 | 39677.2 |
| hypothetical protein | APR52_00365 | Not Available | Negative | 71287 - 74214 | 106945.0 |
| hypothetical protein | APR52_00370 | Not Available | Negative | 74275 - 74658 | 14519.5 |
| hypothetical protein | APR52_00375 | B1Q2A8 | Negative | 74670 - 75602 | 34191.8 |
| isochorismatase | APR52_00380 | Q93Z51 | Positive | 75718 - 76353 | 23004.3 |
| hypothetical protein | APR52_00385 | Not Available | Negative | 76385 - 76810 | 14944.0 |
| hypothetical protein | APR52_00390 | Not Available | Negative | 76807 - 77124 | 11393.6 |
| arac family transcriptional regulator | APR52_00395 | Not Available | Positive | 77226 - 78200 | 34704.0 |
| type vi secretion system vgr family protein | APR52_00400 | Not Available | Positive | 78480 - 80870 | 86123.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
