Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 1 | APR52_09925 | Q8FSH1 | Negative | 2152634 - 2153854 | 43846.6 |
| hypothetical protein | APR52_09930 | Q55946 | Negative | 2153847 - 2154860 | 35520.8 |
| histone acetyltransferase | APR52_09935 | Not Available | Negative | 2154857 - 2155417 | 20733.0 |
| radical sam protein | APR52_09940 | Not Available | Negative | 2155419 - 2156489 | 37713.6 |
| aliphatic nitrilase | APR52_09945 | Q6RWG0 | Negative | 2156452 - 2157525 | 38655.3 |
| hypothetical protein | APR52_09950 | Not Available | Negative | 2157529 - 2158011 | 17749.5 |
| gntr family transcriptional regulator | APR52_09955 | Q01856 | Positive | 2158393 - 2159796 | 50408.7 |
| histidine kinase | APR52_09960 | P35164 | Positive | 2159961 - 2161379 | 52178.6 |
| hypothetical protein | APR52_09965 | Not Available | Positive | 2161535 - 2162746 | 41995.9 |
| luxr family transcriptional regulator | APR52_09970 | P31802 | Negative | 2162831 - 2163430 | 21702.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
