Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | APR52_09875 | Not Available | Positive | 2144568 - 2145056 | 17437.1 |
| hypothetical protein | APR52_09880 | Not Available | Positive | 2145089 - 2145472 | 13205.0 |
| hypothetical protein | APR52_09885 | Not Available | Positive | 2145570 - 2145929 | 12822.7 |
| hypothetical protein | APR52_09890 | Not Available | Positive | 2146003 - 2146872 | 30283.5 |
| mfs transporter | APR52_09895 | Not Available | Negative | 2146889 - 2148118 | 41407.6 |
| lysr family transcriptional regulator | APR52_09900 | Not Available | Positive | 2148241 - 2149221 | 35787.5 |
| lysr family transcriptional regulator | APR52_09905 | O68014 | Positive | 2149249 - 2150148 | 31846.8 |
| permease | APR52_09910 | Not Available | Positive | 2150217 - 2150990 | 26882.1 |
| fad-dependent oxidoreductase | APR52_09915 | Q5L2G3 | Negative | 2151002 - 2152327 | 48815.7 |
| hypothetical protein | APR52_09920 | Not Available | Negative | 2152365 - 2152643 | 10470.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
