Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR52_09825 | Not Available | Positive | 2124467 - 2125261 | 28546.7 |
| hypothetical protein | APR52_09830 | Not Available | Positive | 2125269 - 2126456 | 43006.2 |
| hypothetical protein | APR52_09835 | B0BNC9 | Positive | 2126498 - 2127424 | 32499.3 |
| histidine kinase | APR52_09840 | Q48IV1 | Positive | 2127560 - 2130106 | 93694.5 |
| diguanylate phosphodiesterase | APR52_09845 | Not Available | Negative | 2130103 - 2132226 | 76091.8 |
| fur family transcriptional regulator | APR52_09850 | P0A3E4 | Negative | 2132369 - 2132782 | 15527.6 |
| hypothetical protein | APR52_09855 | Not Available | Negative | 2132912 - 2133136 | 7853.52 |
| phosphonomutase | APR52_09860 | Not Available | Negative | 2133303 - 2134124 | 28525.1 |
| hypothetical protein | APR52_09865 | Not Available | Positive | 2134569 - 2143406 | 280050.0 |
| hypothetical protein | APR52_09870 | Not Available | Positive | 2143758 - 2144492 | 25940.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
