Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | APR52_09720 | Q05202 | Negative | 2097361 - 2099478 | 74862.2 |
| tat pathway signal protein | APR52_09725 | Not Available | Positive | 2099822 - 2100811 | 37101.1 |
| hypothetical protein | APR52_09730 | Not Available | Negative | 2100820 - 2103609 | 98831.4 |
| type ii secretion system protein e | APR52_09735 | P0AFA6 | Negative | 2103606 - 2105303 | 64899.9 |
| hypothetical protein | APR52_09740 | Not Available | Negative | 2105322 - 2107532 | 77658.6 |
| udp-n-acetylglucosamine 2-epimerase | APR52_09745 | Q8ZAE3 | Negative | 2107583 - 2108716 | 41639.1 |
| alpha/beta hydrolase | APR52_09750 | Not Available | Negative | 2108963 - 2110000 | 37535.6 |
| antitoxin of toxin-antitoxin stability system | APR52_09755 | Not Available | Positive | 2110286 - 2110579 | 11231.3 |
| addiction module toxin rele | APR52_09760 | Not Available | Positive | 2110576 - 2110863 | 10801.0 |
| hypothetical protein | APR52_09765 | Not Available | Positive | 2110999 - 2111238 | 8844.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
